Gene : evm_27.TU.AmTr_v1.0_scaffold00062.84 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12866:SF5 - UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10 Genomic Order:  84
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00062.84 Secondary Identifier:  ? PAC:31557225
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00062.84 0.5kb upstream 0.5kb upstream 3434 true AmTr_v1.0_scaffold00062: 1362362-1365795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00062: 1365296-1365795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 0.5kb downstream 0.5kb downstream 3434 true AmTr_v1.0_scaffold00062: 1361862-1365295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00062: 1361862-1362361 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 1.0kb upstream 1.0kb upstream 3934 true AmTr_v1.0_scaffold00062: 1362362-1366295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00062: 1365296-1366295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 1.0kb downstream 1.0kb downstream 3934 true AmTr_v1.0_scaffold00062: 1361362-1365295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00062: 1361362-1362361 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 2.0kb upstream 2.0kb upstream 4934 true AmTr_v1.0_scaffold00062: 1362362-1367295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00062: 1365296-1367295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 2.0kb downstream 2.0kb downstream 4934 true AmTr_v1.0_scaffold00062: 1360362-1365295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00062: 1360362-1362361 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 5.0kb upstream 5.0kb upstream 7934 true AmTr_v1.0_scaffold00062: 1362362-1370295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00062: 1365296-1370295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 5.0kb downstream 5.0kb downstream 7934 true AmTr_v1.0_scaffold00062: 1357362-1365295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00062: 1357362-1362361 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 10.0kb upstream 10.0kb upstream 12934 true AmTr_v1.0_scaffold00062: 1362362-1375295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00062: 1365296-1375295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 10.0kb downstream 10.0kb downstream 12934 true AmTr_v1.0_scaffold00062: 1352362-1365295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.84 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00062: 1352362-1362361 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045044 5273 Angiosperm View MSA
121344822 5274 Embryophyte View MSA
123380107 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain