Gene : evm_27.TU.AmTr_v1.0_scaffold00063.17 A. trichopoda v1.0
Defline:  (1 of 2) PTHR22870:SF219 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN-RELATED Genomic Order:  17
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00063.17 Secondary Identifier:  ? PAC:31569077
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00063.17 0.5kb upstream 0.5kb upstream 46885 true AmTr_v1.0_scaffold00063: 1216250-1263134 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00063: 1262635-1263134 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 0.5kb downstream 0.5kb downstream 46885 true AmTr_v1.0_scaffold00063: 1215750-1262634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00063: 1215750-1216249 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 1.0kb upstream 1.0kb upstream 47385 true AmTr_v1.0_scaffold00063: 1216250-1263634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00063: 1262635-1263634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 1.0kb downstream 1.0kb downstream 47385 true AmTr_v1.0_scaffold00063: 1215250-1262634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00063: 1215250-1216249 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 2.0kb upstream 2.0kb upstream 48385 true AmTr_v1.0_scaffold00063: 1216250-1264634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00063: 1262635-1264634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 2.0kb downstream 2.0kb downstream 48385 true AmTr_v1.0_scaffold00063: 1214250-1262634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00063: 1214250-1216249 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 5.0kb upstream 5.0kb upstream 51385 true AmTr_v1.0_scaffold00063: 1216250-1267634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00063: 1262635-1267634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 5.0kb downstream 5.0kb downstream 51385 true AmTr_v1.0_scaffold00063: 1211250-1262634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00063: 1211250-1216249 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 10.0kb upstream 10.0kb upstream 56385 true AmTr_v1.0_scaffold00063: 1216250-1272634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00063: 1262635-1272634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 10.0kb downstream 10.0kb downstream 56385 true AmTr_v1.0_scaffold00063: 1206250-1262634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00063.17 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00063: 1206250-1216249 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045930 5273 Angiosperm View MSA
121350863 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain