Gene : evm_27.TU.AmTr_v1.0_scaffold00062.124 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12668:SF0 - UPF0136 MEMBRANE PROTEIN CG5532 Genomic Order:  123
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00062.124 Secondary Identifier:  ? PAC:31557239
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00062.124 0.5kb upstream 0.5kb upstream 1048 true AmTr_v1.0_scaffold00062: 2014985-2016032 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00062: 2015533-2016032 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 0.5kb downstream 0.5kb downstream 1048 true AmTr_v1.0_scaffold00062: 2014485-2015532 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00062: 2014485-2014984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 1.0kb upstream 1.0kb upstream 1548 true AmTr_v1.0_scaffold00062: 2014985-2016532 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00062: 2015533-2016532 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 1.0kb downstream 1.0kb downstream 1548 true AmTr_v1.0_scaffold00062: 2013985-2015532 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00062: 2013985-2014984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 2.0kb upstream 2.0kb upstream 2548 true AmTr_v1.0_scaffold00062: 2014985-2017532 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00062: 2015533-2017532 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 2.0kb downstream 2.0kb downstream 2548 true AmTr_v1.0_scaffold00062: 2012985-2015532 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00062: 2012985-2014984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 5.0kb upstream 5.0kb upstream 5548 true AmTr_v1.0_scaffold00062: 2014985-2020532 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00062: 2015533-2020532 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 5.0kb downstream 5.0kb downstream 5548 true AmTr_v1.0_scaffold00062: 2009985-2015532 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00062: 2009985-2014984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 10.0kb upstream 10.0kb upstream 10548 true AmTr_v1.0_scaffold00062: 2014985-2025532 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00062: 2015533-2025532 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 10.0kb downstream 10.0kb downstream 10548 true AmTr_v1.0_scaffold00062: 2004985-2015532 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.124 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00062: 2004985-2014984 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043738 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain