Gene : evm_27.TU.AmTr_v1.0_scaffold00062.199 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11406:SF9 - PHOSPHOGLYCERATE KINASE Genomic Order:  198
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00062.199 Secondary Identifier:  ? PAC:31557266
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ANAEROFRUCAT-PWY Amborella trichopoda pathologic  
Atrichopoda ANAGLYCOLYSIS-PWY Amborella trichopoda pathologic  
Atrichopoda CALVIN-PWY Amborella trichopoda pathologic  
Atrichopoda GLUCONEO-PWY Amborella trichopoda pathologic  
Atrichopoda PHOTOALL-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-1042 Amborella trichopoda pathologic  
Atrichopoda PWY-5464 Amborella trichopoda pathologic  
Atrichopoda SUCSYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00062.199 0.5kb upstream 0.5kb upstream 4410 true AmTr_v1.0_scaffold00062: 3385518-3389927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00062: 3385518-3386017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 0.5kb downstream 0.5kb downstream 4410 true AmTr_v1.0_scaffold00062: 3386018-3390427 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00062: 3389928-3390427 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 1.0kb upstream 1.0kb upstream 4910 true AmTr_v1.0_scaffold00062: 3385018-3389927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00062: 3385018-3386017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 1.0kb downstream 1.0kb downstream 4910 true AmTr_v1.0_scaffold00062: 3386018-3390927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00062: 3389928-3390927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 2.0kb upstream 2.0kb upstream 5910 true AmTr_v1.0_scaffold00062: 3384018-3389927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00062: 3384018-3386017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 2.0kb downstream 2.0kb downstream 5910 true AmTr_v1.0_scaffold00062: 3386018-3391927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00062: 3389928-3391927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 5.0kb upstream 5.0kb upstream 8910 true AmTr_v1.0_scaffold00062: 3381018-3389927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00062: 3381018-3386017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 5.0kb downstream 5.0kb downstream 8910 true AmTr_v1.0_scaffold00062: 3386018-3394927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00062: 3389928-3394927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 10.0kb upstream 10.0kb upstream 13910 true AmTr_v1.0_scaffold00062: 3376018-3389927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00062: 3376018-3386017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 10.0kb downstream 10.0kb downstream 13910 true AmTr_v1.0_scaffold00062: 3386018-3399927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.199 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00062: 3389928-3399927 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040878 5273 Angiosperm View MSA
121348563 5274 Embryophyte View MSA
123423936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain