Gene : evm_27.TU.AmTr_v1.0_scaffold00061.76 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13421:SF16 - SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3 Genomic Order:  73
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00061.76 Secondary Identifier:  ? PAC:31564773
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00061.76 0.5kb upstream 0.5kb upstream 9774 true AmTr_v1.0_scaffold00061: 1215434-1225207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00061: 1215434-1215933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 0.5kb downstream 0.5kb downstream 9774 true AmTr_v1.0_scaffold00061: 1215934-1225707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00061: 1225208-1225707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 1.0kb upstream 1.0kb upstream 10274 true AmTr_v1.0_scaffold00061: 1214934-1225207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00061: 1214934-1215933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 1.0kb downstream 1.0kb downstream 10274 true AmTr_v1.0_scaffold00061: 1215934-1226207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00061: 1225208-1226207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 2.0kb upstream 2.0kb upstream 11274 true AmTr_v1.0_scaffold00061: 1213934-1225207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00061: 1213934-1215933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 2.0kb downstream 2.0kb downstream 11274 true AmTr_v1.0_scaffold00061: 1215934-1227207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00061: 1225208-1227207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 5.0kb upstream 5.0kb upstream 14274 true AmTr_v1.0_scaffold00061: 1210934-1225207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00061: 1210934-1215933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 5.0kb downstream 5.0kb downstream 14274 true AmTr_v1.0_scaffold00061: 1215934-1230207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00061: 1225208-1230207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 10.0kb upstream 10.0kb upstream 19274 true AmTr_v1.0_scaffold00061: 1205934-1225207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00061: 1205934-1215933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 10.0kb downstream 10.0kb downstream 19274 true AmTr_v1.0_scaffold00061: 1215934-1235207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.76 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00061: 1225208-1235207 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043985 5273 Angiosperm View MSA
121347836 5274 Embryophyte View MSA
123424819 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain