Gene : evm_27.TU.AmTr_v1.0_scaffold00066.160 A. trichopoda v1.0
Defline:  (1 of 4) 2.7.6.1 - Ribose-phosphate diphosphokinase / Ribose-phosphate pyrophosphokinase Genomic Order:  160
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00066.160 Secondary Identifier:  ? PAC:31563983
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY0-662 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00066.160 0.5kb upstream 0.5kb upstream 32419 true AmTr_v1.0_scaffold00066: 2350735-2383153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00066: 2350735-2351234 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 0.5kb downstream 0.5kb downstream 32419 true AmTr_v1.0_scaffold00066: 2351235-2383653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00066: 2383154-2383653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 1.0kb upstream 1.0kb upstream 32919 true AmTr_v1.0_scaffold00066: 2350235-2383153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00066: 2350235-2351234 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 1.0kb downstream 1.0kb downstream 32919 true AmTr_v1.0_scaffold00066: 2351235-2384153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00066: 2383154-2384153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 2.0kb upstream 2.0kb upstream 33919 true AmTr_v1.0_scaffold00066: 2349235-2383153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00066: 2349235-2351234 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 2.0kb downstream 2.0kb downstream 33919 true AmTr_v1.0_scaffold00066: 2351235-2385153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00066: 2383154-2385153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 5.0kb upstream 5.0kb upstream 36919 true AmTr_v1.0_scaffold00066: 2346235-2383153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00066: 2346235-2351234 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 5.0kb downstream 5.0kb downstream 36919 true AmTr_v1.0_scaffold00066: 2351235-2388153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00066: 2383154-2388153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 10.0kb upstream 10.0kb upstream 41919 true AmTr_v1.0_scaffold00066: 2341235-2383153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00066: 2341235-2351234 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 10.0kb downstream 10.0kb downstream 41919 true AmTr_v1.0_scaffold00066: 2351235-2393153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.160 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00066: 2383154-2393153 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain