Gene : evm_27.TU.AmTr_v1.0_scaffold00065.98 A. trichopoda v1.0
Defline:  (1 of 1) PTHR31311:SF3 - GLYCOSYLTRANSFERASE 6-RELATED Genomic Order:  97
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00065.98 Secondary Identifier:  ? PAC:31553794
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5936 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00065.98 0.5kb upstream 0.5kb upstream 1937 true AmTr_v1.0_scaffold00065: 2095998-2097934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00065: 2097435-2097934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 0.5kb downstream 0.5kb downstream 1937 true AmTr_v1.0_scaffold00065: 2095498-2097434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00065: 2095498-2095997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 1.0kb upstream 1.0kb upstream 2437 true AmTr_v1.0_scaffold00065: 2095998-2098434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00065: 2097435-2098434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 1.0kb downstream 1.0kb downstream 2437 true AmTr_v1.0_scaffold00065: 2094998-2097434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00065: 2094998-2095997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 2.0kb upstream 2.0kb upstream 3437 true AmTr_v1.0_scaffold00065: 2095998-2099434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00065: 2097435-2099434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 2.0kb downstream 2.0kb downstream 3437 true AmTr_v1.0_scaffold00065: 2093998-2097434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00065: 2093998-2095997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 5.0kb upstream 5.0kb upstream 6437 true AmTr_v1.0_scaffold00065: 2095998-2102434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00065: 2097435-2102434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 5.0kb downstream 5.0kb downstream 6437 true AmTr_v1.0_scaffold00065: 2090998-2097434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00065: 2090998-2095997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 10.0kb upstream 10.0kb upstream 11437 true AmTr_v1.0_scaffold00065: 2095998-2107434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00065: 2097435-2107434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 10.0kb downstream 10.0kb downstream 11437 true AmTr_v1.0_scaffold00065: 2085998-2097434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.98 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00065: 2085998-2095997 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041044 5273 Angiosperm View MSA
121352143 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain