Gene : evm_27.TU.AmTr_v1.0_scaffold00066.128 A. trichopoda v1.0
Defline:  (1 of 1) PTHR22600//PTHR22600:SF18 - BETA-HEXOSAMINIDASE Genomic Order:  128
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00066.128 Secondary Identifier:  ? PAC:31564191
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6902 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00066.128 0.5kb upstream 0.5kb upstream 7957 true AmTr_v1.0_scaffold00066: 1838313-1846269 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00066: 1845770-1846269 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 0.5kb downstream 0.5kb downstream 7957 true AmTr_v1.0_scaffold00066: 1837813-1845769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00066: 1837813-1838312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 1.0kb upstream 1.0kb upstream 8457 true AmTr_v1.0_scaffold00066: 1838313-1846769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00066: 1845770-1846769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 1.0kb downstream 1.0kb downstream 8457 true AmTr_v1.0_scaffold00066: 1837313-1845769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00066: 1837313-1838312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 2.0kb upstream 2.0kb upstream 9457 true AmTr_v1.0_scaffold00066: 1838313-1847769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00066: 1845770-1847769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 2.0kb downstream 2.0kb downstream 9457 true AmTr_v1.0_scaffold00066: 1836313-1845769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00066: 1836313-1838312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 5.0kb upstream 5.0kb upstream 12457 true AmTr_v1.0_scaffold00066: 1838313-1850769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00066: 1845770-1850769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 5.0kb downstream 5.0kb downstream 12457 true AmTr_v1.0_scaffold00066: 1833313-1845769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00066: 1833313-1838312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 10.0kb upstream 10.0kb upstream 17457 true AmTr_v1.0_scaffold00066: 1838313-1855769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00066: 1845770-1855769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 10.0kb downstream 10.0kb downstream 17457 true AmTr_v1.0_scaffold00066: 1828313-1845769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.128 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00066: 1828313-1838312 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain