Gene : evm_27.TU.AmTr_v1.0_scaffold00066.125 A. trichopoda v1.0
Defline:  (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  125
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00066.125 Secondary Identifier:  ? PAC:31564039
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00066.125 0.5kb upstream 0.5kb upstream 3426 true AmTr_v1.0_scaffold00066: 1810224-1813649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00066: 1813150-1813649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 0.5kb downstream 0.5kb downstream 3426 true AmTr_v1.0_scaffold00066: 1809724-1813149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00066: 1809724-1810223 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 1.0kb upstream 1.0kb upstream 3926 true AmTr_v1.0_scaffold00066: 1810224-1814149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00066: 1813150-1814149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 1.0kb downstream 1.0kb downstream 3926 true AmTr_v1.0_scaffold00066: 1809224-1813149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00066: 1809224-1810223 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 2.0kb upstream 2.0kb upstream 4926 true AmTr_v1.0_scaffold00066: 1810224-1815149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00066: 1813150-1815149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 2.0kb downstream 2.0kb downstream 4926 true AmTr_v1.0_scaffold00066: 1808224-1813149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00066: 1808224-1810223 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 5.0kb upstream 5.0kb upstream 7926 true AmTr_v1.0_scaffold00066: 1810224-1818149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00066: 1813150-1818149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 5.0kb downstream 5.0kb downstream 7926 true AmTr_v1.0_scaffold00066: 1805224-1813149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00066: 1805224-1810223 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 10.0kb upstream 10.0kb upstream 12926 true AmTr_v1.0_scaffold00066: 1810224-1823149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00066: 1813150-1823149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 10.0kb downstream 10.0kb downstream 12926 true AmTr_v1.0_scaffold00066: 1800224-1813149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.125 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00066: 1800224-1810223 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain