Gene : evm_27.TU.AmTr_v1.0_scaffold00066.111 A. trichopoda v1.0

Defline:  (1 of 2) 2.7.1.134//2.7.1.159 - Inositol-tetrakisphosphate 1-kinase / Inositol-trisphosphate 6-kinase // Inositol-1,3,4-trisphosphate 5/6-kinase / IP56K Genomic Order:  111
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00066.111 Secondary Identifier:  ? PAC:31564049

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6365 Amborella trichopoda pathologic  
Atrichopoda PWY-6366 Amborella trichopoda pathologic  
Atrichopoda PWY-6554 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00066.111 0.5kb upstream 0.5kb upstream 8310 true AmTr_v1.0_scaffold00066: 1531335-1539644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00066: 1531335-1531834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 0.5kb downstream 0.5kb downstream 8310 true AmTr_v1.0_scaffold00066: 1531835-1540144 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00066: 1539645-1540144 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 1.0kb upstream 1.0kb upstream 8810 true AmTr_v1.0_scaffold00066: 1530835-1539644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00066: 1530835-1531834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 1.0kb downstream 1.0kb downstream 8810 true AmTr_v1.0_scaffold00066: 1531835-1540644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00066: 1539645-1540644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 2.0kb upstream 2.0kb upstream 9810 true AmTr_v1.0_scaffold00066: 1529835-1539644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00066: 1529835-1531834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 2.0kb downstream 2.0kb downstream 9810 true AmTr_v1.0_scaffold00066: 1531835-1541644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00066: 1539645-1541644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 5.0kb upstream 5.0kb upstream 12810 true AmTr_v1.0_scaffold00066: 1526835-1539644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00066: 1526835-1531834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 5.0kb downstream 5.0kb downstream 12810 true AmTr_v1.0_scaffold00066: 1531835-1544644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00066: 1539645-1544644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 10.0kb upstream 10.0kb upstream 17810 true AmTr_v1.0_scaffold00066: 1521835-1539644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00066: 1521835-1531834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 10.0kb downstream 10.0kb downstream 17810 true AmTr_v1.0_scaffold00066: 1531835-1549644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.111 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00066: 1539645-1549644 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045503 5273 Angiosperm View MSA
121345915 5274 Embryophyte View MSA
123428316 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain