Gene : evm_27.TU.AmTr_v1.0_scaffold00065.160 A. trichopoda v1.0
Defline:  (1 of 3) PTHR11387 - CYTOCHROME C OXIDASE POLYPEPTIDE VIB Genomic Order:  159
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00065.160 Secondary Identifier:  ? PAC:31553773
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00065.160 0.5kb upstream 0.5kb upstream 1536 true AmTr_v1.0_scaffold00065: 3276995-3278530 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00065: 3278031-3278530 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 0.5kb downstream 0.5kb downstream 1536 true AmTr_v1.0_scaffold00065: 3276495-3278030 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00065: 3276495-3276994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 1.0kb upstream 1.0kb upstream 2036 true AmTr_v1.0_scaffold00065: 3276995-3279030 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00065: 3278031-3279030 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 1.0kb downstream 1.0kb downstream 2036 true AmTr_v1.0_scaffold00065: 3275995-3278030 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00065: 3275995-3276994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 2.0kb upstream 2.0kb upstream 3036 true AmTr_v1.0_scaffold00065: 3276995-3280030 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00065: 3278031-3280030 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 2.0kb downstream 2.0kb downstream 3036 true AmTr_v1.0_scaffold00065: 3274995-3278030 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00065: 3274995-3276994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 5.0kb upstream 5.0kb upstream 6036 true AmTr_v1.0_scaffold00065: 3276995-3283030 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00065: 3278031-3283030 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 5.0kb downstream 5.0kb downstream 6036 true AmTr_v1.0_scaffold00065: 3271995-3278030 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00065: 3271995-3276994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 10.0kb upstream 10.0kb upstream 11036 true AmTr_v1.0_scaffold00065: 3276995-3288030 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00065: 3278031-3288030 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 10.0kb downstream 10.0kb downstream 11036 true AmTr_v1.0_scaffold00065: 3266995-3278030 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.160 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00065: 3266995-3276994 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042745 5273 Angiosperm View MSA
121350001 5274 Embryophyte View MSA
123426527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain