Gene : evm_27.TU.AmTr_v1.0_scaffold00065.154 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12775 - PROTEIN C20ORF43 HOMOLOG Genomic Order:  153
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00065.154 Secondary Identifier:  ? PAC:31553761
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00065.154 0.5kb upstream 0.5kb upstream 1667 true AmTr_v1.0_scaffold00065: 3054259-3055925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00065: 3054259-3054758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 0.5kb downstream 0.5kb downstream 1667 true AmTr_v1.0_scaffold00065: 3054759-3056425 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00065: 3055926-3056425 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 1.0kb upstream 1.0kb upstream 2167 true AmTr_v1.0_scaffold00065: 3053759-3055925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00065: 3053759-3054758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 1.0kb downstream 1.0kb downstream 2167 true AmTr_v1.0_scaffold00065: 3054759-3056925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00065: 3055926-3056925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 2.0kb upstream 2.0kb upstream 3167 true AmTr_v1.0_scaffold00065: 3052759-3055925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00065: 3052759-3054758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 2.0kb downstream 2.0kb downstream 3167 true AmTr_v1.0_scaffold00065: 3054759-3057925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00065: 3055926-3057925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 5.0kb upstream 5.0kb upstream 6167 true AmTr_v1.0_scaffold00065: 3049759-3055925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00065: 3049759-3054758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 5.0kb downstream 5.0kb downstream 6167 true AmTr_v1.0_scaffold00065: 3054759-3060925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00065: 3055926-3060925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 10.0kb upstream 10.0kb upstream 11167 true AmTr_v1.0_scaffold00065: 3044759-3055925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00065: 3044759-3054758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 10.0kb downstream 10.0kb downstream 11167 true AmTr_v1.0_scaffold00065: 3054759-3065925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.154 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00065: 3055926-3065925 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046209 5273 Angiosperm View MSA
121350063 5274 Embryophyte View MSA
123426844 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain