Gene : evm_27.TU.AmTr_v1.0_scaffold00065.156 A. trichopoda v1.0
Defline:  (1 of 11) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  155
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00065.156 Secondary Identifier:  ? PAC:31553629
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00065.156 0.5kb upstream 0.5kb upstream 1913 true AmTr_v1.0_scaffold00065: 3085505-3087417 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00065: 3085505-3086004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 0.5kb downstream 0.5kb downstream 1913 true AmTr_v1.0_scaffold00065: 3086005-3087917 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00065: 3087418-3087917 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 1.0kb upstream 1.0kb upstream 2413 true AmTr_v1.0_scaffold00065: 3085005-3087417 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00065: 3085005-3086004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 1.0kb downstream 1.0kb downstream 2413 true AmTr_v1.0_scaffold00065: 3086005-3088417 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00065: 3087418-3088417 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 2.0kb upstream 2.0kb upstream 3413 true AmTr_v1.0_scaffold00065: 3084005-3087417 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00065: 3084005-3086004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 2.0kb downstream 2.0kb downstream 3413 true AmTr_v1.0_scaffold00065: 3086005-3089417 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00065: 3087418-3089417 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 5.0kb upstream 5.0kb upstream 6413 true AmTr_v1.0_scaffold00065: 3081005-3087417 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00065: 3081005-3086004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 5.0kb downstream 5.0kb downstream 6413 true AmTr_v1.0_scaffold00065: 3086005-3092417 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00065: 3087418-3092417 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 10.0kb upstream 10.0kb upstream 11413 true AmTr_v1.0_scaffold00065: 3076005-3087417 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00065: 3076005-3086004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 10.0kb downstream 10.0kb downstream 11413 true AmTr_v1.0_scaffold00065: 3086005-3097417 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.156 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00065: 3087418-3097417 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046913 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain