Gene : evm_27.TU.AmTr_v1.0_scaffold00065.42 A. trichopoda v1.0
Defline:  (1 of 72) PF00847 - AP2 domain (AP2) Genomic Order:  42
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00065.42 Secondary Identifier:  ? PAC:31553759
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00065.42 0.5kb upstream 0.5kb upstream 4420 true AmTr_v1.0_scaffold00065: 855887-860306 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00065: 859807-860306 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 0.5kb downstream 0.5kb downstream 4420 true AmTr_v1.0_scaffold00065: 855387-859806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00065: 855387-855886 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 1.0kb upstream 1.0kb upstream 4920 true AmTr_v1.0_scaffold00065: 855887-860806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00065: 859807-860806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 1.0kb downstream 1.0kb downstream 4920 true AmTr_v1.0_scaffold00065: 854887-859806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00065: 854887-855886 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 2.0kb upstream 2.0kb upstream 5920 true AmTr_v1.0_scaffold00065: 855887-861806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00065: 859807-861806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 2.0kb downstream 2.0kb downstream 5920 true AmTr_v1.0_scaffold00065: 853887-859806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00065: 853887-855886 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 5.0kb upstream 5.0kb upstream 8920 true AmTr_v1.0_scaffold00065: 855887-864806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00065: 859807-864806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 5.0kb downstream 5.0kb downstream 8920 true AmTr_v1.0_scaffold00065: 850887-859806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00065: 850887-855886 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 10.0kb upstream 10.0kb upstream 13920 true AmTr_v1.0_scaffold00065: 855887-869806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00065: 859807-869806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 10.0kb downstream 10.0kb downstream 13920 true AmTr_v1.0_scaffold00065: 845887-859806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.42 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00065: 845887-855886 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048323 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain