Gene : evm_27.TU.AmTr_v1.0_scaffold00064.38 A. trichopoda v1.0
Defline:  (1 of 1) 1.13.11.5 - Homogentisate 1,2-dioxygenase / Homogentisicase Genomic Order:  38
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00064.38 Secondary Identifier:  ? PAC:31567219
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00064.38 0.5kb upstream 0.5kb upstream 49141 true AmTr_v1.0_scaffold00064: 1218767-1267907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00064: 1218767-1219266 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 0.5kb downstream 0.5kb downstream 49141 true AmTr_v1.0_scaffold00064: 1219267-1268407 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00064: 1267908-1268407 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 1.0kb upstream 1.0kb upstream 49641 true AmTr_v1.0_scaffold00064: 1218267-1267907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00064: 1218267-1219266 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 1.0kb downstream 1.0kb downstream 49641 true AmTr_v1.0_scaffold00064: 1219267-1268907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00064: 1267908-1268907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 2.0kb upstream 2.0kb upstream 50641 true AmTr_v1.0_scaffold00064: 1217267-1267907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00064: 1217267-1219266 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 2.0kb downstream 2.0kb downstream 50641 true AmTr_v1.0_scaffold00064: 1219267-1269907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00064: 1267908-1269907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 5.0kb upstream 5.0kb upstream 53641 true AmTr_v1.0_scaffold00064: 1214267-1267907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00064: 1214267-1219266 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 5.0kb downstream 5.0kb downstream 53641 true AmTr_v1.0_scaffold00064: 1219267-1272907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00064: 1267908-1272907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 10.0kb upstream 10.0kb upstream 58641 true AmTr_v1.0_scaffold00064: 1209267-1267907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00064: 1209267-1219266 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 10.0kb downstream 10.0kb downstream 58641 true AmTr_v1.0_scaffold00064: 1219267-1277907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.38 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00064: 1267908-1277907 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042428 5273 Angiosperm View MSA
121346859 5274 Embryophyte View MSA
123424235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain