Gene : evm_27.TU.AmTr_v1.0_scaffold00065.101 A. trichopoda v1.0
Defline:  (1 of 1) PTHR31843:SF2 - ALLENE OXIDE CYCLASE 1, CHLOROPLASTIC-RELATED Genomic Order:  100
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00065.101 Secondary Identifier:  ? PAC:31553640
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-735 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00065.101 0.5kb upstream 0.5kb upstream 1874 true AmTr_v1.0_scaffold00065: 2144759-2146632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00065: 2146133-2146632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 0.5kb downstream 0.5kb downstream 1874 true AmTr_v1.0_scaffold00065: 2144259-2146132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00065: 2144259-2144758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 1.0kb upstream 1.0kb upstream 2374 true AmTr_v1.0_scaffold00065: 2144759-2147132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00065: 2146133-2147132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 1.0kb downstream 1.0kb downstream 2374 true AmTr_v1.0_scaffold00065: 2143759-2146132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00065: 2143759-2144758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 2.0kb upstream 2.0kb upstream 3374 true AmTr_v1.0_scaffold00065: 2144759-2148132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00065: 2146133-2148132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 2.0kb downstream 2.0kb downstream 3374 true AmTr_v1.0_scaffold00065: 2142759-2146132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00065: 2142759-2144758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 5.0kb upstream 5.0kb upstream 6374 true AmTr_v1.0_scaffold00065: 2144759-2151132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00065: 2146133-2151132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 5.0kb downstream 5.0kb downstream 6374 true AmTr_v1.0_scaffold00065: 2139759-2146132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00065: 2139759-2144758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 10.0kb upstream 10.0kb upstream 11374 true AmTr_v1.0_scaffold00065: 2144759-2156132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00065: 2146133-2156132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 10.0kb downstream 10.0kb downstream 11374 true AmTr_v1.0_scaffold00065: 2134759-2146132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.101 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00065: 2134759-2144758 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain