Gene : evm_27.TU.AmTr_v1.0_scaffold00064.47 A. trichopoda v1.0
Defline:  (1 of 1) KOG3302 - TATA-box binding protein (TBP), component of TFIID and TFIIIB Genomic Order:  47
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00064.47 Secondary Identifier:  ? PAC:31567260
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00064.47 0.5kb upstream 0.5kb upstream 19726 true AmTr_v1.0_scaffold00064: 1682759-1702484 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00064: 1701985-1702484 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 0.5kb downstream 0.5kb downstream 19726 true AmTr_v1.0_scaffold00064: 1682259-1701984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00064: 1682259-1682758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 1.0kb upstream 1.0kb upstream 20226 true AmTr_v1.0_scaffold00064: 1682759-1702984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00064: 1701985-1702984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 1.0kb downstream 1.0kb downstream 20226 true AmTr_v1.0_scaffold00064: 1681759-1701984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00064: 1681759-1682758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 2.0kb upstream 2.0kb upstream 21226 true AmTr_v1.0_scaffold00064: 1682759-1703984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00064: 1701985-1703984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 2.0kb downstream 2.0kb downstream 21226 true AmTr_v1.0_scaffold00064: 1680759-1701984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00064: 1680759-1682758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 5.0kb upstream 5.0kb upstream 24226 true AmTr_v1.0_scaffold00064: 1682759-1706984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00064: 1701985-1706984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 5.0kb downstream 5.0kb downstream 24226 true AmTr_v1.0_scaffold00064: 1677759-1701984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00064: 1677759-1682758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 10.0kb upstream 10.0kb upstream 29226 true AmTr_v1.0_scaffold00064: 1682759-1711984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00064: 1701985-1711984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 10.0kb downstream 10.0kb downstream 29226 true AmTr_v1.0_scaffold00064: 1672759-1701984 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.47 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00064: 1672759-1682758 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046126 5273 Angiosperm View MSA
123429185 5275 Viridiplantae View MSA
121349658 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain