Gene : evm_27.TU.AmTr_v1.0_scaffold00064.46 A. trichopoda v1.0
Defline:  (1 of 3) PF05553//PF14364 - Cotton fibre expressed protein (DUF761) // Domain of unknown function (DUF4408) (DUF4408) Genomic Order:  46
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00064.46 Secondary Identifier:  ? PAC:31567226
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00064.46 0.5kb upstream 0.5kb upstream 1205 true AmTr_v1.0_scaffold00064: 1641710-1642914 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00064: 1642415-1642914 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 0.5kb downstream 0.5kb downstream 1205 true AmTr_v1.0_scaffold00064: 1641210-1642414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00064: 1641210-1641709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 1.0kb upstream 1.0kb upstream 1705 true AmTr_v1.0_scaffold00064: 1641710-1643414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00064: 1642415-1643414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 1.0kb downstream 1.0kb downstream 1705 true AmTr_v1.0_scaffold00064: 1640710-1642414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00064: 1640710-1641709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 2.0kb upstream 2.0kb upstream 2705 true AmTr_v1.0_scaffold00064: 1641710-1644414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00064: 1642415-1644414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 2.0kb downstream 2.0kb downstream 2705 true AmTr_v1.0_scaffold00064: 1639710-1642414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00064: 1639710-1641709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 5.0kb upstream 5.0kb upstream 5705 true AmTr_v1.0_scaffold00064: 1641710-1647414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00064: 1642415-1647414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 5.0kb downstream 5.0kb downstream 5705 true AmTr_v1.0_scaffold00064: 1636710-1642414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00064: 1636710-1641709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 10.0kb upstream 10.0kb upstream 10705 true AmTr_v1.0_scaffold00064: 1641710-1652414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00064: 1642415-1652414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 10.0kb downstream 10.0kb downstream 10705 true AmTr_v1.0_scaffold00064: 1631710-1642414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.46 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00064: 1631710-1641709 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041618 5273 Angiosperm View MSA
121309871 5274 Embryophyte View MSA
123347511 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain