Gene : evm_27.TU.AmTr_v1.0_scaffold00068.177 A. trichopoda v1.0
Defline:  (1 of 1) PF02791//PF10537//PF15613//PF15614 - DDT domain (DDT) // ATP-utilising chromatin assembly and remodelling N-terminal (WAC_Acf1_DNA_bd) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Genomic Order:  175
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00068.177 Secondary Identifier:  ? PAC:31573398
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00068.177 0.5kb upstream 0.5kb upstream 15034 true AmTr_v1.0_scaffold00068: 3796289-3811322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00068: 3796289-3796788 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 0.5kb downstream 0.5kb downstream 15034 true AmTr_v1.0_scaffold00068: 3796789-3811822 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00068: 3811323-3811822 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 1.0kb upstream 1.0kb upstream 15534 true AmTr_v1.0_scaffold00068: 3795789-3811322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00068: 3795789-3796788 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 1.0kb downstream 1.0kb downstream 15534 true AmTr_v1.0_scaffold00068: 3796789-3812322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00068: 3811323-3812322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 2.0kb upstream 2.0kb upstream 16534 true AmTr_v1.0_scaffold00068: 3794789-3811322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00068: 3794789-3796788 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 2.0kb downstream 2.0kb downstream 16534 true AmTr_v1.0_scaffold00068: 3796789-3813322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00068: 3811323-3813322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 5.0kb upstream 5.0kb upstream 19534 true AmTr_v1.0_scaffold00068: 3791789-3811322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00068: 3791789-3796788 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 5.0kb downstream 5.0kb downstream 19534 true AmTr_v1.0_scaffold00068: 3796789-3816322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00068: 3811323-3816322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 10.0kb upstream 10.0kb upstream 24534 true AmTr_v1.0_scaffold00068: 3786789-3811322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00068: 3786789-3796788 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 10.0kb downstream 10.0kb downstream 24534 true AmTr_v1.0_scaffold00068: 3796789-3821322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.177 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00068: 3811323-3821322 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050407 5273 Angiosperm View MSA
121345343 5274 Embryophyte View MSA
123380199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain