Gene : evm_27.TU.AmTr_v1.0_scaffold00068.172 A. trichopoda v1.0
Defline:  (1 of 1) KOG3219 - Transcription initiation factor TFIID, subunit TAF11 Genomic Order:  170
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00068.172 Secondary Identifier:  ? PAC:31573391
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00068.172 0.5kb upstream 0.5kb upstream 7950 true AmTr_v1.0_scaffold00068: 3720913-3728862 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00068: 3728363-3728862 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 0.5kb downstream 0.5kb downstream 7950 true AmTr_v1.0_scaffold00068: 3720413-3728362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00068: 3720413-3720912 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 1.0kb upstream 1.0kb upstream 8450 true AmTr_v1.0_scaffold00068: 3720913-3729362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00068: 3728363-3729362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 1.0kb downstream 1.0kb downstream 8450 true AmTr_v1.0_scaffold00068: 3719913-3728362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00068: 3719913-3720912 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 2.0kb upstream 2.0kb upstream 9450 true AmTr_v1.0_scaffold00068: 3720913-3730362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00068: 3728363-3730362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 2.0kb downstream 2.0kb downstream 9450 true AmTr_v1.0_scaffold00068: 3718913-3728362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00068: 3718913-3720912 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 5.0kb upstream 5.0kb upstream 12450 true AmTr_v1.0_scaffold00068: 3720913-3733362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00068: 3728363-3733362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 5.0kb downstream 5.0kb downstream 12450 true AmTr_v1.0_scaffold00068: 3715913-3728362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00068: 3715913-3720912 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 10.0kb upstream 10.0kb upstream 17450 true AmTr_v1.0_scaffold00068: 3720913-3738362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00068: 3728363-3738362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 10.0kb downstream 10.0kb downstream 17450 true AmTr_v1.0_scaffold00068: 3710913-3728362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.172 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00068: 3710913-3720912 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046222 5273 Angiosperm View MSA
121348235 5274 Embryophyte View MSA
123426477 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain