Gene : evm_27.TU.AmTr_v1.0_scaffold00068.75 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11205:SF24 - 40S RIBOSOMAL PROTEIN S5-1-RELATED Genomic Order:  74
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00068.75 Secondary Identifier:  ? PAC:31573395
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00068.75 0.5kb upstream 0.5kb upstream 11109 true AmTr_v1.0_scaffold00068: 1562636-1573744 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00068: 1562636-1563135 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 0.5kb downstream 0.5kb downstream 11109 true AmTr_v1.0_scaffold00068: 1563136-1574244 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00068: 1573745-1574244 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 1.0kb upstream 1.0kb upstream 11609 true AmTr_v1.0_scaffold00068: 1562136-1573744 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00068: 1562136-1563135 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 1.0kb downstream 1.0kb downstream 11609 true AmTr_v1.0_scaffold00068: 1563136-1574744 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00068: 1573745-1574744 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 2.0kb upstream 2.0kb upstream 12609 true AmTr_v1.0_scaffold00068: 1561136-1573744 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00068: 1561136-1563135 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 2.0kb downstream 2.0kb downstream 12609 true AmTr_v1.0_scaffold00068: 1563136-1575744 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00068: 1573745-1575744 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 5.0kb upstream 5.0kb upstream 15609 true AmTr_v1.0_scaffold00068: 1558136-1573744 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00068: 1558136-1563135 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 5.0kb downstream 5.0kb downstream 15609 true AmTr_v1.0_scaffold00068: 1563136-1578744 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00068: 1573745-1578744 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 10.0kb upstream 10.0kb upstream 20609 true AmTr_v1.0_scaffold00068: 1553136-1573744 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00068: 1553136-1563135 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 10.0kb downstream 10.0kb downstream 20609 true AmTr_v1.0_scaffold00068: 1563136-1583744 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.75 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00068: 1573745-1583744 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain