Gene : evm_27.TU.AmTr_v1.0_scaffold00068.152 A. trichopoda v1.0
Defline:  (1 of 1) PTHR33398:SF2 - 30S RIBOSOMAL PROTEIN S20, CHLOROPLASTIC Genomic Order:  151
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00068.152 Secondary Identifier:  ? PAC:31573430
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00068.152 0.5kb upstream 0.5kb upstream 3895 true AmTr_v1.0_scaffold00068: 3300618-3304512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00068: 3300618-3301117 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 0.5kb downstream 0.5kb downstream 3895 true AmTr_v1.0_scaffold00068: 3301118-3305012 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00068: 3304513-3305012 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 1.0kb upstream 1.0kb upstream 4395 true AmTr_v1.0_scaffold00068: 3300118-3304512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00068: 3300118-3301117 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 1.0kb downstream 1.0kb downstream 4395 true AmTr_v1.0_scaffold00068: 3301118-3305512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00068: 3304513-3305512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 2.0kb upstream 2.0kb upstream 5395 true AmTr_v1.0_scaffold00068: 3299118-3304512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00068: 3299118-3301117 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 2.0kb downstream 2.0kb downstream 5395 true AmTr_v1.0_scaffold00068: 3301118-3306512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00068: 3304513-3306512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 5.0kb upstream 5.0kb upstream 8395 true AmTr_v1.0_scaffold00068: 3296118-3304512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00068: 3296118-3301117 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 5.0kb downstream 5.0kb downstream 8395 true AmTr_v1.0_scaffold00068: 3301118-3309512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00068: 3304513-3309512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 10.0kb upstream 10.0kb upstream 13395 true AmTr_v1.0_scaffold00068: 3291118-3304512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00068: 3291118-3301117 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 10.0kb downstream 10.0kb downstream 13395 true AmTr_v1.0_scaffold00068: 3301118-3314512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.152 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00068: 3304513-3314512 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027102 5273 Angiosperm View MSA
121345926 5274 Embryophyte View MSA
123425445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain