Gene : evm_27.TU.AmTr_v1.0_scaffold00068.142 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23078 - VESICULAR-FUSION PROTEIN NSF Genomic Order:  141
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00068.142 Secondary Identifier:  ? PAC:31573525
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00068.142 0.5kb upstream 0.5kb upstream 12971 true AmTr_v1.0_scaffold00068: 3116466-3129436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00068: 3128937-3129436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 0.5kb downstream 0.5kb downstream 12971 true AmTr_v1.0_scaffold00068: 3115966-3128936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00068: 3115966-3116465 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 1.0kb upstream 1.0kb upstream 13471 true AmTr_v1.0_scaffold00068: 3116466-3129936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00068: 3128937-3129936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 1.0kb downstream 1.0kb downstream 13471 true AmTr_v1.0_scaffold00068: 3115466-3128936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00068: 3115466-3116465 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 2.0kb upstream 2.0kb upstream 14471 true AmTr_v1.0_scaffold00068: 3116466-3130936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00068: 3128937-3130936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 2.0kb downstream 2.0kb downstream 14471 true AmTr_v1.0_scaffold00068: 3114466-3128936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00068: 3114466-3116465 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 5.0kb upstream 5.0kb upstream 17471 true AmTr_v1.0_scaffold00068: 3116466-3133936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00068: 3128937-3133936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 5.0kb downstream 5.0kb downstream 17471 true AmTr_v1.0_scaffold00068: 3111466-3128936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00068: 3111466-3116465 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 10.0kb upstream 10.0kb upstream 22471 true AmTr_v1.0_scaffold00068: 3116466-3138936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00068: 3128937-3138936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 10.0kb downstream 10.0kb downstream 22471 true AmTr_v1.0_scaffold00068: 3106466-3128936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.142 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00068: 3106466-3116465 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044573 5273 Angiosperm View MSA
121350302 5274 Embryophyte View MSA
123424602 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain