Gene : evm_27.TU.AmTr_v1.0_scaffold00067.29 A. trichopoda v1.0
Defline:  (1 of 2) PTHR23315:SF119 - U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  29
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00067.29 Secondary Identifier:  ? PAC:31561604
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7511 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00067.29 0.5kb upstream 0.5kb upstream 4830 true AmTr_v1.0_scaffold00067: 454084-458913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00067: 454084-454583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 0.5kb downstream 0.5kb downstream 4830 true AmTr_v1.0_scaffold00067: 454584-459413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00067: 458914-459413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 1.0kb upstream 1.0kb upstream 5330 true AmTr_v1.0_scaffold00067: 453584-458913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00067: 453584-454583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 1.0kb downstream 1.0kb downstream 5330 true AmTr_v1.0_scaffold00067: 454584-459913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00067: 458914-459913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 2.0kb upstream 2.0kb upstream 6330 true AmTr_v1.0_scaffold00067: 452584-458913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00067: 452584-454583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 2.0kb downstream 2.0kb downstream 6330 true AmTr_v1.0_scaffold00067: 454584-460913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00067: 458914-460913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 5.0kb upstream 5.0kb upstream 9330 true AmTr_v1.0_scaffold00067: 449584-458913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00067: 449584-454583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 5.0kb downstream 5.0kb downstream 9330 true AmTr_v1.0_scaffold00067: 454584-463913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00067: 458914-463913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 10.0kb upstream 10.0kb upstream 14330 true AmTr_v1.0_scaffold00067: 444584-458913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00067: 444584-454583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 10.0kb downstream 10.0kb downstream 14330 true AmTr_v1.0_scaffold00067: 454584-468913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.29 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00067: 458914-468913 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain