Gene : evm_27.TU.AmTr_v1.0_scaffold00066.80 A. trichopoda v1.0
Defline:  (1 of 37) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  80
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00066.80 Secondary Identifier:  ? PAC:31564142
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00066.80 0.5kb upstream 0.5kb upstream 1553 true AmTr_v1.0_scaffold00066: 1210970-1212522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00066: 1212023-1212522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 0.5kb downstream 0.5kb downstream 1553 true AmTr_v1.0_scaffold00066: 1210470-1212022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00066: 1210470-1210969 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 1.0kb upstream 1.0kb upstream 2053 true AmTr_v1.0_scaffold00066: 1210970-1213022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00066: 1212023-1213022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 1.0kb downstream 1.0kb downstream 2053 true AmTr_v1.0_scaffold00066: 1209970-1212022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00066: 1209970-1210969 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 2.0kb upstream 2.0kb upstream 3053 true AmTr_v1.0_scaffold00066: 1210970-1214022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00066: 1212023-1214022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 2.0kb downstream 2.0kb downstream 3053 true AmTr_v1.0_scaffold00066: 1208970-1212022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00066: 1208970-1210969 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 5.0kb upstream 5.0kb upstream 6053 true AmTr_v1.0_scaffold00066: 1210970-1217022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00066: 1212023-1217022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 5.0kb downstream 5.0kb downstream 6053 true AmTr_v1.0_scaffold00066: 1205970-1212022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00066: 1205970-1210969 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 10.0kb upstream 10.0kb upstream 11053 true AmTr_v1.0_scaffold00066: 1210970-1222022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00066: 1212023-1222022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 10.0kb downstream 10.0kb downstream 11053 true AmTr_v1.0_scaffold00066: 1200970-1212022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.80 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00066: 1200970-1210969 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045066 5273 Angiosperm View MSA
121350373 5274 Embryophyte View MSA
123381702 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain