Gene : evm_27.TU.AmTr_v1.0_scaffold00067.12 A. trichopoda v1.0
Defline:  (1 of 18) PF00190 - Cupin (Cupin_1) Genomic Order:  12
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00067.12 Secondary Identifier:  ? PAC:31561550
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00067.12 0.5kb upstream 0.5kb upstream 3714 true AmTr_v1.0_scaffold00067: 171779-175492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00067: 171779-172278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 0.5kb downstream 0.5kb downstream 3714 true AmTr_v1.0_scaffold00067: 172279-175992 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00067: 175493-175992 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 1.0kb upstream 1.0kb upstream 4214 true AmTr_v1.0_scaffold00067: 171279-175492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00067: 171279-172278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 1.0kb downstream 1.0kb downstream 4214 true AmTr_v1.0_scaffold00067: 172279-176492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00067: 175493-176492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 2.0kb upstream 2.0kb upstream 5214 true AmTr_v1.0_scaffold00067: 170279-175492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00067: 170279-172278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 2.0kb downstream 2.0kb downstream 5214 true AmTr_v1.0_scaffold00067: 172279-177492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00067: 175493-177492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 5.0kb upstream 5.0kb upstream 8214 true AmTr_v1.0_scaffold00067: 167279-175492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00067: 167279-172278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 5.0kb downstream 5.0kb downstream 8214 true AmTr_v1.0_scaffold00067: 172279-180492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00067: 175493-180492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 10.0kb upstream 10.0kb upstream 13214 true AmTr_v1.0_scaffold00067: 162279-175492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00067: 162279-172278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 10.0kb downstream 10.0kb downstream 13214 true AmTr_v1.0_scaffold00067: 172279-185492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.12 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00067: 175493-185492 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051681 5273 Angiosperm View MSA
121312610 5274 Embryophyte View MSA
123349767 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain