Gene : evm_27.TU.AmTr_v1.0_scaffold00067.11 A. trichopoda v1.0
Defline:  (1 of 18) PF00190 - Cupin (Cupin_1) Genomic Order:  11
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00067.11 Secondary Identifier:  ? PAC:31561537
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00067.11 0.5kb upstream 0.5kb upstream 3482 true AmTr_v1.0_scaffold00067: 160695-164176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00067: 160695-161194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 0.5kb downstream 0.5kb downstream 3482 true AmTr_v1.0_scaffold00067: 161195-164676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00067: 164177-164676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 1.0kb upstream 1.0kb upstream 3982 true AmTr_v1.0_scaffold00067: 160195-164176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00067: 160195-161194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 1.0kb downstream 1.0kb downstream 3982 true AmTr_v1.0_scaffold00067: 161195-165176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00067: 164177-165176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 2.0kb upstream 2.0kb upstream 4982 true AmTr_v1.0_scaffold00067: 159195-164176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00067: 159195-161194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 2.0kb downstream 2.0kb downstream 4982 true AmTr_v1.0_scaffold00067: 161195-166176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00067: 164177-166176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 5.0kb upstream 5.0kb upstream 7982 true AmTr_v1.0_scaffold00067: 156195-164176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00067: 156195-161194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 5.0kb downstream 5.0kb downstream 7982 true AmTr_v1.0_scaffold00067: 161195-169176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00067: 164177-169176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 10.0kb upstream 10.0kb upstream 12982 true AmTr_v1.0_scaffold00067: 151195-164176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00067: 151195-161194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 10.0kb downstream 10.0kb downstream 12982 true AmTr_v1.0_scaffold00067: 161195-174176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.11 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00067: 164177-174176 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051681 5273 Angiosperm View MSA
121312610 5274 Embryophyte View MSA
123349767 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain