Gene : evm_27.TU.AmTr_v1.0_scaffold00066.96 A. trichopoda v1.0
Defline:  (1 of 1) PTHR31742:SF1 - RPA-INTERACTING PROTEIN Genomic Order:  96
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00066.96 Secondary Identifier:  ? PAC:31563947
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00066.96 0.5kb upstream 0.5kb upstream 7503 true AmTr_v1.0_scaffold00066: 1363020-1370522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00066: 1363020-1363519 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 0.5kb downstream 0.5kb downstream 7503 true AmTr_v1.0_scaffold00066: 1363520-1371022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00066: 1370523-1371022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 1.0kb upstream 1.0kb upstream 8003 true AmTr_v1.0_scaffold00066: 1362520-1370522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00066: 1362520-1363519 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 1.0kb downstream 1.0kb downstream 8003 true AmTr_v1.0_scaffold00066: 1363520-1371522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00066: 1370523-1371522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 2.0kb upstream 2.0kb upstream 9003 true AmTr_v1.0_scaffold00066: 1361520-1370522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00066: 1361520-1363519 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 2.0kb downstream 2.0kb downstream 9003 true AmTr_v1.0_scaffold00066: 1363520-1372522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00066: 1370523-1372522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 5.0kb upstream 5.0kb upstream 12003 true AmTr_v1.0_scaffold00066: 1358520-1370522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00066: 1358520-1363519 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 5.0kb downstream 5.0kb downstream 12003 true AmTr_v1.0_scaffold00066: 1363520-1375522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00066: 1370523-1375522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 10.0kb upstream 10.0kb upstream 17003 true AmTr_v1.0_scaffold00066: 1353520-1370522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00066: 1353520-1363519 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 10.0kb downstream 10.0kb downstream 17003 true AmTr_v1.0_scaffold00066: 1363520-1380522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.96 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00066: 1370523-1380522 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044802 5273 Angiosperm View MSA
121346952 5274 Embryophyte View MSA
123424751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain