Gene : evm_27.TU.AmTr_v1.0_scaffold00066.85 A. trichopoda v1.0
Defline:  (1 of 2) 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Genomic Order:  85
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00066.85 Secondary Identifier:  ? PAC:31564083
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-1269 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00066.85 0.5kb upstream 0.5kb upstream 11058 true AmTr_v1.0_scaffold00066: 1249762-1260819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00066: 1249762-1250261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 0.5kb downstream 0.5kb downstream 11058 true AmTr_v1.0_scaffold00066: 1250262-1261319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00066: 1260820-1261319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 1.0kb upstream 1.0kb upstream 11558 true AmTr_v1.0_scaffold00066: 1249262-1260819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00066: 1249262-1250261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 1.0kb downstream 1.0kb downstream 11558 true AmTr_v1.0_scaffold00066: 1250262-1261819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00066: 1260820-1261819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 2.0kb upstream 2.0kb upstream 12558 true AmTr_v1.0_scaffold00066: 1248262-1260819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00066: 1248262-1250261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 2.0kb downstream 2.0kb downstream 12558 true AmTr_v1.0_scaffold00066: 1250262-1262819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00066: 1260820-1262819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 5.0kb upstream 5.0kb upstream 15558 true AmTr_v1.0_scaffold00066: 1245262-1260819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00066: 1245262-1250261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 5.0kb downstream 5.0kb downstream 15558 true AmTr_v1.0_scaffold00066: 1250262-1265819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00066: 1260820-1265819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 10.0kb upstream 10.0kb upstream 20558 true AmTr_v1.0_scaffold00066: 1240262-1260819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00066: 1240262-1250261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 10.0kb downstream 10.0kb downstream 20558 true AmTr_v1.0_scaffold00066: 1250262-1270819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00066.85 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00066: 1260820-1270819 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050140 5273 Angiosperm View MSA
121346522 5274 Embryophyte View MSA
123424720 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain