Gene : evm_27.TU.AmTr_v1.0_scaffold00071.215 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11945:SF152 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL12 Genomic Order:  212
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00071.215 Secondary Identifier:  ? PAC:31561315
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00071.215 0.5kb upstream 0.5kb upstream 6075 true AmTr_v1.0_scaffold00071: 3633864-3639938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00071: 3639439-3639938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 0.5kb downstream 0.5kb downstream 6075 true AmTr_v1.0_scaffold00071: 3633364-3639438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00071: 3633364-3633863 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 1.0kb upstream 1.0kb upstream 6575 true AmTr_v1.0_scaffold00071: 3633864-3640438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00071: 3639439-3640438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 1.0kb downstream 1.0kb downstream 6575 true AmTr_v1.0_scaffold00071: 3632864-3639438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00071: 3632864-3633863 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 2.0kb upstream 2.0kb upstream 7575 true AmTr_v1.0_scaffold00071: 3633864-3641438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00071: 3639439-3641438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 2.0kb downstream 2.0kb downstream 7575 true AmTr_v1.0_scaffold00071: 3631864-3639438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00071: 3631864-3633863 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 5.0kb upstream 5.0kb upstream 10575 true AmTr_v1.0_scaffold00071: 3633864-3644438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00071: 3639439-3644438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 5.0kb downstream 5.0kb downstream 10575 true AmTr_v1.0_scaffold00071: 3628864-3639438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00071: 3628864-3633863 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 10.0kb upstream 10.0kb upstream 15575 true AmTr_v1.0_scaffold00071: 3633864-3649438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00071: 3639439-3649438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 10.0kb downstream 10.0kb downstream 15575 true AmTr_v1.0_scaffold00071: 3623864-3639438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.215 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00071: 3623864-3633863 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026526 5273 Angiosperm View MSA
121296369 5274 Embryophyte View MSA
123334545 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain