Gene : evm_27.TU.AmTr_v1.0_scaffold00071.178 A. trichopoda v1.0
Defline:  (1 of 1) PTHR22904:SF373 - PROTEIN TIC 40, CHLOROPLASTIC Genomic Order:  175
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00071.178 Secondary Identifier:  ? PAC:31561138
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00071.178 0.5kb upstream 0.5kb upstream 25472 true AmTr_v1.0_scaffold00071: 2893736-2919207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00071: 2918708-2919207 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 0.5kb downstream 0.5kb downstream 25472 true AmTr_v1.0_scaffold00071: 2893236-2918707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00071: 2893236-2893735 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 1.0kb upstream 1.0kb upstream 25972 true AmTr_v1.0_scaffold00071: 2893736-2919707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00071: 2918708-2919707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 1.0kb downstream 1.0kb downstream 25972 true AmTr_v1.0_scaffold00071: 2892736-2918707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00071: 2892736-2893735 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 2.0kb upstream 2.0kb upstream 26972 true AmTr_v1.0_scaffold00071: 2893736-2920707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00071: 2918708-2920707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 2.0kb downstream 2.0kb downstream 26972 true AmTr_v1.0_scaffold00071: 2891736-2918707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00071: 2891736-2893735 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 5.0kb upstream 5.0kb upstream 29972 true AmTr_v1.0_scaffold00071: 2893736-2923707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00071: 2918708-2923707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 5.0kb downstream 5.0kb downstream 29972 true AmTr_v1.0_scaffold00071: 2888736-2918707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00071: 2888736-2893735 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 10.0kb upstream 10.0kb upstream 34972 true AmTr_v1.0_scaffold00071: 2893736-2928707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00071: 2918708-2928707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 10.0kb downstream 10.0kb downstream 34972 true AmTr_v1.0_scaffold00071: 2883736-2918707 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.178 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00071: 2883736-2893735 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043574 5273 Angiosperm View MSA
121344558 5274 Embryophyte View MSA
123424576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain