Gene : evm_27.TU.AmTr_v1.0_scaffold00071.72 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13370 - RNA METHYLASE-RELATED Genomic Order:  71
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00071.72 Secondary Identifier:  ? PAC:31561186
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6829 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00071.72 0.5kb upstream 0.5kb upstream 9181 true AmTr_v1.0_scaffold00071: 1157272-1166452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00071: 1157272-1157771 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 0.5kb downstream 0.5kb downstream 9181 true AmTr_v1.0_scaffold00071: 1157772-1166952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00071: 1166453-1166952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 1.0kb upstream 1.0kb upstream 9681 true AmTr_v1.0_scaffold00071: 1156772-1166452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00071: 1156772-1157771 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 1.0kb downstream 1.0kb downstream 9681 true AmTr_v1.0_scaffold00071: 1157772-1167452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00071: 1166453-1167452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 2.0kb upstream 2.0kb upstream 10681 true AmTr_v1.0_scaffold00071: 1155772-1166452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00071: 1155772-1157771 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 2.0kb downstream 2.0kb downstream 10681 true AmTr_v1.0_scaffold00071: 1157772-1168452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00071: 1166453-1168452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 5.0kb upstream 5.0kb upstream 13681 true AmTr_v1.0_scaffold00071: 1152772-1166452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00071: 1152772-1157771 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 5.0kb downstream 5.0kb downstream 13681 true AmTr_v1.0_scaffold00071: 1157772-1171452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00071: 1166453-1171452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 10.0kb upstream 10.0kb upstream 18681 true AmTr_v1.0_scaffold00071: 1147772-1166452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00071: 1147772-1157771 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 10.0kb downstream 10.0kb downstream 18681 true AmTr_v1.0_scaffold00071: 1157772-1176452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.72 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00071: 1166453-1176452 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048014 5273 Angiosperm View MSA
121347099 5274 Embryophyte View MSA
123424311 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain