Gene : evm_27.TU.AmTr_v1.0_scaffold00070.48 A. trichopoda v1.0
Defline:  (1 of 2) 4.4.1.8 - Cystathionine beta-lyase / Cystine lyase Genomic Order:  48
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00070.48 Secondary Identifier:  ? PAC:31563046
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6936 Amborella trichopoda pathologic  
Atrichopoda PWY-702 Amborella trichopoda pathologic  
Atrichopoda PWY-724 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00070.48 0.5kb upstream 0.5kb upstream 38431 true AmTr_v1.0_scaffold00070: 1165301-1203731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00070: 1165301-1165800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 0.5kb downstream 0.5kb downstream 38431 true AmTr_v1.0_scaffold00070: 1165801-1204231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00070: 1203732-1204231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 1.0kb upstream 1.0kb upstream 38931 true AmTr_v1.0_scaffold00070: 1164801-1203731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00070: 1164801-1165800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 1.0kb downstream 1.0kb downstream 38931 true AmTr_v1.0_scaffold00070: 1165801-1204731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00070: 1203732-1204731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 2.0kb upstream 2.0kb upstream 39931 true AmTr_v1.0_scaffold00070: 1163801-1203731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00070: 1163801-1165800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 2.0kb downstream 2.0kb downstream 39931 true AmTr_v1.0_scaffold00070: 1165801-1205731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00070: 1203732-1205731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 5.0kb upstream 5.0kb upstream 42931 true AmTr_v1.0_scaffold00070: 1160801-1203731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00070: 1160801-1165800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 5.0kb downstream 5.0kb downstream 42931 true AmTr_v1.0_scaffold00070: 1165801-1208731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00070: 1203732-1208731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 10.0kb upstream 10.0kb upstream 47931 true AmTr_v1.0_scaffold00070: 1155801-1203731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00070: 1155801-1165800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 10.0kb downstream 10.0kb downstream 47931 true AmTr_v1.0_scaffold00070: 1165801-1213731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.48 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00070: 1203732-1213731 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041211 5273 Angiosperm View MSA
121349443 5274 Embryophyte View MSA
123424610 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain