Gene : evm_27.TU.AmTr_v1.0_scaffold00070.39 A. trichopoda v1.0
Defline:  (1 of 37) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  39
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00070.39 Secondary Identifier:  ? PAC:31563062
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00070.39 0.5kb upstream 0.5kb upstream 2490 true AmTr_v1.0_scaffold00070: 933472-935961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00070: 935462-935961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 0.5kb downstream 0.5kb downstream 2490 true AmTr_v1.0_scaffold00070: 932972-935461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00070: 932972-933471 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 1.0kb upstream 1.0kb upstream 2990 true AmTr_v1.0_scaffold00070: 933472-936461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00070: 935462-936461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 1.0kb downstream 1.0kb downstream 2990 true AmTr_v1.0_scaffold00070: 932472-935461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00070: 932472-933471 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 2.0kb upstream 2.0kb upstream 3990 true AmTr_v1.0_scaffold00070: 933472-937461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00070: 935462-937461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 2.0kb downstream 2.0kb downstream 3990 true AmTr_v1.0_scaffold00070: 931472-935461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00070: 931472-933471 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 5.0kb upstream 5.0kb upstream 6990 true AmTr_v1.0_scaffold00070: 933472-940461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00070: 935462-940461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 5.0kb downstream 5.0kb downstream 6990 true AmTr_v1.0_scaffold00070: 928472-935461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00070: 928472-933471 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 10.0kb upstream 10.0kb upstream 11990 true AmTr_v1.0_scaffold00070: 933472-945461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00070: 935462-945461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 10.0kb downstream 10.0kb downstream 11990 true AmTr_v1.0_scaffold00070: 923472-935461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.39 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00070: 923472-933471 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049008 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain