Gene : evm_27.TU.AmTr_v1.0_scaffold00071.12 A. trichopoda v1.0
Defline:  (1 of 1) PF11910 - Cyanobacterial and plant NDH-1 subunit O (NdhO) Genomic Order:  11
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00071.12 Secondary Identifier:  ? PAC:31561156
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00071.12 0.5kb upstream 0.5kb upstream 6076 true AmTr_v1.0_scaffold00071: 173301-179376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00071: 173301-173800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 0.5kb downstream 0.5kb downstream 6076 true AmTr_v1.0_scaffold00071: 173801-179876 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00071: 179377-179876 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 1.0kb upstream 1.0kb upstream 6576 true AmTr_v1.0_scaffold00071: 172801-179376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00071: 172801-173800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 1.0kb downstream 1.0kb downstream 6576 true AmTr_v1.0_scaffold00071: 173801-180376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00071: 179377-180376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 2.0kb upstream 2.0kb upstream 7576 true AmTr_v1.0_scaffold00071: 171801-179376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00071: 171801-173800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 2.0kb downstream 2.0kb downstream 7576 true AmTr_v1.0_scaffold00071: 173801-181376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00071: 179377-181376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 5.0kb upstream 5.0kb upstream 10576 true AmTr_v1.0_scaffold00071: 168801-179376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00071: 168801-173800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 5.0kb downstream 5.0kb downstream 10576 true AmTr_v1.0_scaffold00071: 173801-184376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00071: 179377-184376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 10.0kb upstream 10.0kb upstream 15576 true AmTr_v1.0_scaffold00071: 163801-179376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00071: 163801-173800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 10.0kb downstream 10.0kb downstream 15576 true AmTr_v1.0_scaffold00071: 173801-189376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.12 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00071: 179377-189376 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043742 5273 Angiosperm View MSA
121347549 5274 Embryophyte View MSA
123380569 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain