Gene : evm_27.TU.AmTr_v1.0_scaffold00071.120 A. trichopoda v1.0
Defline:  (1 of 1) PF08642 - Histone deacetylation protein Rxt3 (Rxt3) Genomic Order:  118
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00071.120 Secondary Identifier:  ? PAC:31561318
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00071.120 0.5kb upstream 0.5kb upstream 15149 true AmTr_v1.0_scaffold00071: 1887924-1903072 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00071: 1887924-1888423 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 0.5kb downstream 0.5kb downstream 15149 true AmTr_v1.0_scaffold00071: 1888424-1903572 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00071: 1903073-1903572 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 1.0kb upstream 1.0kb upstream 15649 true AmTr_v1.0_scaffold00071: 1887424-1903072 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00071: 1887424-1888423 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 1.0kb downstream 1.0kb downstream 15649 true AmTr_v1.0_scaffold00071: 1888424-1904072 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00071: 1903073-1904072 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 2.0kb upstream 2.0kb upstream 16649 true AmTr_v1.0_scaffold00071: 1886424-1903072 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00071: 1886424-1888423 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 2.0kb downstream 2.0kb downstream 16649 true AmTr_v1.0_scaffold00071: 1888424-1905072 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00071: 1903073-1905072 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 5.0kb upstream 5.0kb upstream 19649 true AmTr_v1.0_scaffold00071: 1883424-1903072 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00071: 1883424-1888423 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 5.0kb downstream 5.0kb downstream 19649 true AmTr_v1.0_scaffold00071: 1888424-1908072 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00071: 1903073-1908072 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 10.0kb upstream 10.0kb upstream 24649 true AmTr_v1.0_scaffold00071: 1878424-1903072 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00071: 1878424-1888423 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 10.0kb downstream 10.0kb downstream 24649 true AmTr_v1.0_scaffold00071: 1888424-1913072 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.120 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00071: 1903073-1913072 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049778 5273 Angiosperm View MSA
121311587 5274 Embryophyte View MSA
123426365 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain