Gene : evm_27.TU.AmTr_v1.0_scaffold00069.7 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11735:SF12 - TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED Genomic Order:  7
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00069.7 Secondary Identifier:  ? PAC:31558184
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY0-1587 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00069.7 0.5kb upstream 0.5kb upstream 33257 true AmTr_v1.0_scaffold00069: 97237-130493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00069: 97237-97736 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 0.5kb downstream 0.5kb downstream 33257 true AmTr_v1.0_scaffold00069: 97737-130993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00069: 130494-130993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 1.0kb upstream 1.0kb upstream 33757 true AmTr_v1.0_scaffold00069: 96737-130493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00069: 96737-97736 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 1.0kb downstream 1.0kb downstream 33757 true AmTr_v1.0_scaffold00069: 97737-131493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00069: 130494-131493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 2.0kb upstream 2.0kb upstream 34757 true AmTr_v1.0_scaffold00069: 95737-130493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00069: 95737-97736 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 2.0kb downstream 2.0kb downstream 34757 true AmTr_v1.0_scaffold00069: 97737-132493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00069: 130494-132493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 5.0kb upstream 5.0kb upstream 37757 true AmTr_v1.0_scaffold00069: 92737-130493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00069: 92737-97736 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 5.0kb downstream 5.0kb downstream 37757 true AmTr_v1.0_scaffold00069: 97737-135493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00069: 130494-135493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 10.0kb upstream 10.0kb upstream 42757 true AmTr_v1.0_scaffold00069: 87737-130493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00069: 87737-97736 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 10.0kb downstream 10.0kb downstream 42757 true AmTr_v1.0_scaffold00069: 97737-140493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.7 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00069: 130494-140493 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043416 5273 Angiosperm View MSA
121345797 5274 Embryophyte View MSA
123425080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain