Gene : evm_27.TU.AmTr_v1.0_scaffold00070.134 A. trichopoda v1.0

Defline:  (1 of 1) PTHR11353:SF107 - 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Genomic Order:  132
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00070.134 Secondary Identifier:  ? PAC:31563061

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6352 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00070.134 0.5kb upstream 0.5kb upstream 10151 true AmTr_v1.0_scaffold00070: 3654397-3664547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00070: 3654397-3654896 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 0.5kb downstream 0.5kb downstream 10151 true AmTr_v1.0_scaffold00070: 3654897-3665047 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00070: 3664548-3665047 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 1.0kb upstream 1.0kb upstream 10651 true AmTr_v1.0_scaffold00070: 3653897-3664547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00070: 3653897-3654896 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 1.0kb downstream 1.0kb downstream 10651 true AmTr_v1.0_scaffold00070: 3654897-3665547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00070: 3664548-3665547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 2.0kb upstream 2.0kb upstream 11651 true AmTr_v1.0_scaffold00070: 3652897-3664547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00070: 3652897-3654896 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 2.0kb downstream 2.0kb downstream 11651 true AmTr_v1.0_scaffold00070: 3654897-3666547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00070: 3664548-3666547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 5.0kb upstream 5.0kb upstream 14651 true AmTr_v1.0_scaffold00070: 3649897-3664547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00070: 3649897-3654896 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 5.0kb downstream 5.0kb downstream 14651 true AmTr_v1.0_scaffold00070: 3654897-3669547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00070: 3664548-3669547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 10.0kb upstream 10.0kb upstream 19651 true AmTr_v1.0_scaffold00070: 3644897-3664547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00070: 3644897-3654896 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 10.0kb downstream 10.0kb downstream 19651 true AmTr_v1.0_scaffold00070: 3654897-3674547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00070.134 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00070: 3664548-3674547 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain