Gene : evm_27.TU.AmTr_v1.0_scaffold00077.110 A. trichopoda v1.0
Defline:  (1 of 2) PTHR21641 - TRANSLATION INITIATION FACTOR-RELATED Genomic Order:  108
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00077.110 Secondary Identifier:  ? PAC:31566768
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00077.110 0.5kb upstream 0.5kb upstream 5508 true AmTr_v1.0_scaffold00077: 1564587-1570094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00077: 1564587-1565086 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 0.5kb downstream 0.5kb downstream 5508 true AmTr_v1.0_scaffold00077: 1565087-1570594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00077: 1570095-1570594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 1.0kb upstream 1.0kb upstream 6008 true AmTr_v1.0_scaffold00077: 1564087-1570094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00077: 1564087-1565086 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 1.0kb downstream 1.0kb downstream 6008 true AmTr_v1.0_scaffold00077: 1565087-1571094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00077: 1570095-1571094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 2.0kb upstream 2.0kb upstream 7008 true AmTr_v1.0_scaffold00077: 1563087-1570094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00077: 1563087-1565086 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 2.0kb downstream 2.0kb downstream 7008 true AmTr_v1.0_scaffold00077: 1565087-1572094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00077: 1570095-1572094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 5.0kb upstream 5.0kb upstream 10008 true AmTr_v1.0_scaffold00077: 1560087-1570094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00077: 1560087-1565086 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 5.0kb downstream 5.0kb downstream 10008 true AmTr_v1.0_scaffold00077: 1565087-1575094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00077: 1570095-1575094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 10.0kb upstream 10.0kb upstream 15008 true AmTr_v1.0_scaffold00077: 1555087-1570094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00077: 1555087-1565086 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 10.0kb downstream 10.0kb downstream 15008 true AmTr_v1.0_scaffold00077: 1565087-1580094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.110 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00077: 1570095-1580094 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047089 5273 Angiosperm View MSA
121344267 5274 Embryophyte View MSA
123425448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain