Gene : evm_27.TU.AmTr_v1.0_scaffold00077.181 A. trichopoda v1.0
Defline:  (1 of 1) PTHR33284:SF1 - RIBOSOMAL L25/TL5/CTC N-TERMINAL 5S RRNA BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  179
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00077.181 Secondary Identifier:  ? PAC:31566990
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00077.181 0.5kb upstream 0.5kb upstream 11049 true AmTr_v1.0_scaffold00077: 2671902-2682950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00077: 2671902-2672401 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 0.5kb downstream 0.5kb downstream 11049 true AmTr_v1.0_scaffold00077: 2672402-2683450 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00077: 2682951-2683450 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 1.0kb upstream 1.0kb upstream 11549 true AmTr_v1.0_scaffold00077: 2671402-2682950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00077: 2671402-2672401 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 1.0kb downstream 1.0kb downstream 11549 true AmTr_v1.0_scaffold00077: 2672402-2683950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00077: 2682951-2683950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 2.0kb upstream 2.0kb upstream 12549 true AmTr_v1.0_scaffold00077: 2670402-2682950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00077: 2670402-2672401 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 2.0kb downstream 2.0kb downstream 12549 true AmTr_v1.0_scaffold00077: 2672402-2684950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00077: 2682951-2684950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 5.0kb upstream 5.0kb upstream 15549 true AmTr_v1.0_scaffold00077: 2667402-2682950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00077: 2667402-2672401 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 5.0kb downstream 5.0kb downstream 15549 true AmTr_v1.0_scaffold00077: 2672402-2687950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00077: 2682951-2687950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 10.0kb upstream 10.0kb upstream 20549 true AmTr_v1.0_scaffold00077: 2662402-2682950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00077: 2662402-2672401 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 10.0kb downstream 10.0kb downstream 20549 true AmTr_v1.0_scaffold00077: 2672402-2692950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.181 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00077: 2682951-2692950 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044337 5273 Angiosperm View MSA
121344036 5274 Embryophyte View MSA
123426023 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain