Gene : evm_27.TU.AmTr_v1.0_scaffold00075.28 A. trichopoda v1.0
Defline:  (1 of 1) KOG2872 - Uroporphyrinogen decarboxylase Genomic Order:  28
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00075.28 Secondary Identifier:  ? PAC:31556919
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda CHLOROPHYLL-SYN Amborella trichopoda pathologic  
Atrichopoda HEME-BIOSYNTHESIS-II Amborella trichopoda pathologic  
Atrichopoda PWY-5918 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00075.28 0.5kb upstream 0.5kb upstream 27991 true AmTr_v1.0_scaffold00075: 1061877-1089867 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00075: 1061877-1062376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 0.5kb downstream 0.5kb downstream 27991 true AmTr_v1.0_scaffold00075: 1062377-1090367 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00075: 1089868-1090367 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 1.0kb upstream 1.0kb upstream 28491 true AmTr_v1.0_scaffold00075: 1061377-1089867 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00075: 1061377-1062376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 1.0kb downstream 1.0kb downstream 28491 true AmTr_v1.0_scaffold00075: 1062377-1090867 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00075: 1089868-1090867 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 2.0kb upstream 2.0kb upstream 29491 true AmTr_v1.0_scaffold00075: 1060377-1089867 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00075: 1060377-1062376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 2.0kb downstream 2.0kb downstream 29491 true AmTr_v1.0_scaffold00075: 1062377-1091867 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00075: 1089868-1091867 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 5.0kb upstream 5.0kb upstream 32491 true AmTr_v1.0_scaffold00075: 1057377-1089867 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00075: 1057377-1062376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 5.0kb downstream 5.0kb downstream 32491 true AmTr_v1.0_scaffold00075: 1062377-1094867 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00075: 1089868-1094867 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 10.0kb upstream 10.0kb upstream 37491 true AmTr_v1.0_scaffold00075: 1052377-1089867 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00075: 1052377-1062376 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 10.0kb downstream 10.0kb downstream 37491 true AmTr_v1.0_scaffold00075: 1062377-1099867 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00075.28 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00075: 1089868-1099867 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051227 5273 Angiosperm View MSA
121345426 5274 Embryophyte View MSA
123424899 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain