Gene : evm_27.TU.AmTr_v1.0_scaffold00072.117 A. trichopoda v1.0
Defline:  (1 of 2) PTHR12965 - VACUOLAR PROTEIN SORTING 54 Genomic Order:  117
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00072.117 Secondary Identifier:  ? PAC:31572541
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00072.117 0.5kb upstream 0.5kb upstream 56985 true AmTr_v1.0_scaffold00072: 2693695-2750679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00072: 2693695-2694194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 0.5kb downstream 0.5kb downstream 56985 true AmTr_v1.0_scaffold00072: 2694195-2751179 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00072: 2750680-2751179 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 1.0kb upstream 1.0kb upstream 57485 true AmTr_v1.0_scaffold00072: 2693195-2750679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00072: 2693195-2694194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 1.0kb downstream 1.0kb downstream 57485 true AmTr_v1.0_scaffold00072: 2694195-2751679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00072: 2750680-2751679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 2.0kb upstream 2.0kb upstream 58485 true AmTr_v1.0_scaffold00072: 2692195-2750679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00072: 2692195-2694194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 2.0kb downstream 2.0kb downstream 58485 true AmTr_v1.0_scaffold00072: 2694195-2752679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00072: 2750680-2752679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 5.0kb upstream 5.0kb upstream 61485 true AmTr_v1.0_scaffold00072: 2689195-2750679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00072: 2689195-2694194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 5.0kb downstream 5.0kb downstream 61485 true AmTr_v1.0_scaffold00072: 2694195-2755679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00072: 2750680-2755679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 10.0kb upstream 10.0kb upstream 66485 true AmTr_v1.0_scaffold00072: 2684195-2750679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00072: 2684195-2694194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 10.0kb downstream 10.0kb downstream 66485 true AmTr_v1.0_scaffold00072: 2694195-2760679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.117 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00072: 2750680-2760679 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042289 5273 Angiosperm View MSA
121346645 5274 Embryophyte View MSA
123425367 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain