Gene : evm_27.TU.AmTr_v1.0_scaffold00071.97 A. trichopoda v1.0
Defline:  (1 of 1) 2.7.4.7 - Phosphomethylpyrimidine kinase / Hydroxymethylpyrimidine phosphokinase Genomic Order:  95
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00071.97 Secondary Identifier:  ? PAC:31561145
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6890 Amborella trichopoda pathologic  
Atrichopoda PWY-6908 Amborella trichopoda pathologic  
Atrichopoda PWY-6910 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00071.97 0.5kb upstream 0.5kb upstream 8762 true AmTr_v1.0_scaffold00071: 1612784-1621545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00071: 1621046-1621545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 0.5kb downstream 0.5kb downstream 8762 true AmTr_v1.0_scaffold00071: 1612284-1621045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00071: 1612284-1612783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 1.0kb upstream 1.0kb upstream 9262 true AmTr_v1.0_scaffold00071: 1612784-1622045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00071: 1621046-1622045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 1.0kb downstream 1.0kb downstream 9262 true AmTr_v1.0_scaffold00071: 1611784-1621045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00071: 1611784-1612783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 2.0kb upstream 2.0kb upstream 10262 true AmTr_v1.0_scaffold00071: 1612784-1623045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00071: 1621046-1623045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 2.0kb downstream 2.0kb downstream 10262 true AmTr_v1.0_scaffold00071: 1610784-1621045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00071: 1610784-1612783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 5.0kb upstream 5.0kb upstream 13262 true AmTr_v1.0_scaffold00071: 1612784-1626045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00071: 1621046-1626045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 5.0kb downstream 5.0kb downstream 13262 true AmTr_v1.0_scaffold00071: 1607784-1621045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00071: 1607784-1612783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 10.0kb upstream 10.0kb upstream 18262 true AmTr_v1.0_scaffold00071: 1612784-1631045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00071: 1621046-1631045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 10.0kb downstream 10.0kb downstream 18262 true AmTr_v1.0_scaffold00071: 1602784-1621045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.97 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00071: 1602784-1612783 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045389 5273 Angiosperm View MSA
121344045 5274 Embryophyte View MSA
123424693 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain