Gene : evm_27.TU.AmTr_v1.0_scaffold00080.5 A. trichopoda v1.0
Genomic Order:  5 Name:  ? evm_27.TU.AmTr_v1.0_scaffold00080.5
Secondary Identifier:  ? PAC:31554459
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00080.5 0.5kb upstream 0.5kb upstream 1082 true AmTr_v1.0_scaffold00080: 189167-190248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00080: 189167-189666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 0.5kb downstream 0.5kb downstream 1082 true AmTr_v1.0_scaffold00080: 189667-190748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00080: 190249-190748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 1.0kb upstream 1.0kb upstream 1582 true AmTr_v1.0_scaffold00080: 188667-190248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00080: 188667-189666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 1.0kb downstream 1.0kb downstream 1582 true AmTr_v1.0_scaffold00080: 189667-191248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00080: 190249-191248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 2.0kb upstream 2.0kb upstream 2582 true AmTr_v1.0_scaffold00080: 187667-190248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00080: 187667-189666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 2.0kb downstream 2.0kb downstream 2582 true AmTr_v1.0_scaffold00080: 189667-192248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00080: 190249-192248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 5.0kb upstream 5.0kb upstream 5582 true AmTr_v1.0_scaffold00080: 184667-190248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00080: 184667-189666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 5.0kb downstream 5.0kb downstream 5582 true AmTr_v1.0_scaffold00080: 189667-195248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00080: 190249-195248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 10.0kb upstream 10.0kb upstream 10582 true AmTr_v1.0_scaffold00080: 179667-190248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00080: 179667-189666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 10.0kb downstream 10.0kb downstream 10582 true AmTr_v1.0_scaffold00080: 189667-200248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.5 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00080: 190249-200248 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122038777 5273 Angiosperm Singleton cluster - no MSA
121307672 5274 Embryophyte Singleton cluster - no MSA
123345340 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain