Gene : evm_27.TU.AmTr_v1.0_scaffold00079.120 A. trichopoda v1.0
Defline:  (1 of 1) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase / Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Genomic Order:  117
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00079.120 Secondary Identifier:  ? PAC:31564397
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda HISTSYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00079.120 0.5kb upstream 0.5kb upstream 4635 true AmTr_v1.0_scaffold00079: 3385084-3389718 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00079: 3389219-3389718 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 0.5kb downstream 0.5kb downstream 4635 true AmTr_v1.0_scaffold00079: 3384584-3389218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00079: 3384584-3385083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 1.0kb upstream 1.0kb upstream 5135 true AmTr_v1.0_scaffold00079: 3385084-3390218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00079: 3389219-3390218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 1.0kb downstream 1.0kb downstream 5135 true AmTr_v1.0_scaffold00079: 3384084-3389218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00079: 3384084-3385083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 2.0kb upstream 2.0kb upstream 6135 true AmTr_v1.0_scaffold00079: 3385084-3391218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00079: 3389219-3391218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 2.0kb downstream 2.0kb downstream 6135 true AmTr_v1.0_scaffold00079: 3383084-3389218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00079: 3383084-3385083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 5.0kb upstream 5.0kb upstream 9135 true AmTr_v1.0_scaffold00079: 3385084-3394218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00079: 3389219-3394218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 5.0kb downstream 5.0kb downstream 9135 true AmTr_v1.0_scaffold00079: 3380084-3389218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00079: 3380084-3385083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 10.0kb upstream 10.0kb upstream 14135 true AmTr_v1.0_scaffold00079: 3385084-3399218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00079: 3389219-3399218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 10.0kb downstream 10.0kb downstream 14135 true AmTr_v1.0_scaffold00079: 3375084-3389218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.120 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00079: 3375084-3385083 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041281 5273 Angiosperm View MSA
121347171 5274 Embryophyte View MSA
123424389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain