Gene : evm_27.TU.AmTr_v1.0_scaffold00077.238 A. trichopoda v1.0
Defline:  (1 of 2) PF09341 - Transcription factor Pcc1 (Pcc1) Genomic Order:  234
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00077.238 Secondary Identifier:  ? PAC:31566767
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00077.238 0.5kb upstream 0.5kb upstream 3680 true AmTr_v1.0_scaffold00077: 3512759-3516438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00077: 3515939-3516438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 0.5kb downstream 0.5kb downstream 3680 true AmTr_v1.0_scaffold00077: 3512259-3515938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00077: 3512259-3512758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 1.0kb upstream 1.0kb upstream 4180 true AmTr_v1.0_scaffold00077: 3512759-3516938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00077: 3515939-3516938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 1.0kb downstream 1.0kb downstream 4180 true AmTr_v1.0_scaffold00077: 3511759-3515938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00077: 3511759-3512758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 2.0kb upstream 2.0kb upstream 5180 true AmTr_v1.0_scaffold00077: 3512759-3517938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00077: 3515939-3517938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 2.0kb downstream 2.0kb downstream 5180 true AmTr_v1.0_scaffold00077: 3510759-3515938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00077: 3510759-3512758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 5.0kb upstream 5.0kb upstream 8180 true AmTr_v1.0_scaffold00077: 3512759-3520938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00077: 3515939-3520938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 5.0kb downstream 5.0kb downstream 8180 true AmTr_v1.0_scaffold00077: 3507759-3515938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00077: 3507759-3512758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 10.0kb upstream 10.0kb upstream 13180 true AmTr_v1.0_scaffold00077: 3512759-3525938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00077: 3515939-3525938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 10.0kb downstream 10.0kb downstream 13180 true AmTr_v1.0_scaffold00077: 3502759-3515938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00077.238 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00077: 3502759-3512758 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043690 5273 Angiosperm View MSA
121347192 5274 Embryophyte View MSA
123380508 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain