Gene : evm_27.TU.AmTr_v1.0_scaffold00088.157 A. trichopoda v1.0
Defline:  (1 of 24) PF03000 - NPH3 family (NPH3) Genomic Order:  155
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00088.157 Secondary Identifier:  ? PAC:31575248
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00088.157 0.5kb upstream 0.5kb upstream 3329 true AmTr_v1.0_scaffold00088: 2949366-2952694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00088: 2949366-2949865 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 0.5kb downstream 0.5kb downstream 3329 true AmTr_v1.0_scaffold00088: 2949866-2953194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00088: 2952695-2953194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 1.0kb upstream 1.0kb upstream 3829 true AmTr_v1.0_scaffold00088: 2948866-2952694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00088: 2948866-2949865 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 1.0kb downstream 1.0kb downstream 3829 true AmTr_v1.0_scaffold00088: 2949866-2953694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00088: 2952695-2953694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 2.0kb upstream 2.0kb upstream 4829 true AmTr_v1.0_scaffold00088: 2947866-2952694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00088: 2947866-2949865 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 2.0kb downstream 2.0kb downstream 4829 true AmTr_v1.0_scaffold00088: 2949866-2954694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00088: 2952695-2954694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 5.0kb upstream 5.0kb upstream 7829 true AmTr_v1.0_scaffold00088: 2944866-2952694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00088: 2944866-2949865 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 5.0kb downstream 5.0kb downstream 7829 true AmTr_v1.0_scaffold00088: 2949866-2957694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00088: 2952695-2957694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 10.0kb upstream 10.0kb upstream 12829 true AmTr_v1.0_scaffold00088: 2939866-2952694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00088: 2939866-2949865 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 10.0kb downstream 10.0kb downstream 12829 true AmTr_v1.0_scaffold00088: 2949866-2962694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.157 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00088: 2952695-2962694 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044122 5273 Angiosperm View MSA
121348430 5274 Embryophyte View MSA
123380863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain