Gene : evm_27.TU.AmTr_v1.0_scaffold00088.123 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13405:SF11 - NUCLEAR PORE COMPLEX PROTEIN NUP133 Genomic Order:  121
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00088.123 Secondary Identifier:  ? PAC:31575264
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00088.123 0.5kb upstream 0.5kb upstream 16099 true AmTr_v1.0_scaffold00088: 2299637-2315735 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00088: 2315236-2315735 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 0.5kb downstream 0.5kb downstream 16099 true AmTr_v1.0_scaffold00088: 2299137-2315235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00088: 2299137-2299636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 1.0kb upstream 1.0kb upstream 16599 true AmTr_v1.0_scaffold00088: 2299637-2316235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00088: 2315236-2316235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 1.0kb downstream 1.0kb downstream 16599 true AmTr_v1.0_scaffold00088: 2298637-2315235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00088: 2298637-2299636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 2.0kb upstream 2.0kb upstream 17599 true AmTr_v1.0_scaffold00088: 2299637-2317235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00088: 2315236-2317235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 2.0kb downstream 2.0kb downstream 17599 true AmTr_v1.0_scaffold00088: 2297637-2315235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00088: 2297637-2299636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 5.0kb upstream 5.0kb upstream 20599 true AmTr_v1.0_scaffold00088: 2299637-2320235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00088: 2315236-2320235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 5.0kb downstream 5.0kb downstream 20599 true AmTr_v1.0_scaffold00088: 2294637-2315235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00088: 2294637-2299636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 10.0kb upstream 10.0kb upstream 25599 true AmTr_v1.0_scaffold00088: 2299637-2325235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00088: 2315236-2325235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 10.0kb downstream 10.0kb downstream 25599 true AmTr_v1.0_scaffold00088: 2289637-2315235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.123 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00088: 2289637-2299636 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045150 5273 Angiosperm View MSA
121345241 5274 Embryophyte View MSA
123424593 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain