Gene : evm_27.TU.AmTr_v1.0_scaffold00088.129 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13068:SF13 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  127
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00088.129 Secondary Identifier:  ? PAC:31575208
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00088.129 0.5kb upstream 0.5kb upstream 9747 true AmTr_v1.0_scaffold00088: 2458279-2468025 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00088: 2467526-2468025 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 0.5kb downstream 0.5kb downstream 9747 true AmTr_v1.0_scaffold00088: 2457779-2467525 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00088: 2457779-2458278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 1.0kb upstream 1.0kb upstream 10247 true AmTr_v1.0_scaffold00088: 2458279-2468525 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00088: 2467526-2468525 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 1.0kb downstream 1.0kb downstream 10247 true AmTr_v1.0_scaffold00088: 2457279-2467525 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00088: 2457279-2458278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 2.0kb upstream 2.0kb upstream 11247 true AmTr_v1.0_scaffold00088: 2458279-2469525 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00088: 2467526-2469525 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 2.0kb downstream 2.0kb downstream 11247 true AmTr_v1.0_scaffold00088: 2456279-2467525 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00088: 2456279-2458278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 5.0kb upstream 5.0kb upstream 14247 true AmTr_v1.0_scaffold00088: 2458279-2472525 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00088: 2467526-2472525 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 5.0kb downstream 5.0kb downstream 14247 true AmTr_v1.0_scaffold00088: 2453279-2467525 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00088: 2453279-2458278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 10.0kb upstream 10.0kb upstream 19247 true AmTr_v1.0_scaffold00088: 2458279-2477525 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00088: 2467526-2477525 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 10.0kb downstream 10.0kb downstream 19247 true AmTr_v1.0_scaffold00088: 2448279-2467525 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.129 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00088: 2448279-2458278 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044660 5273 Angiosperm View MSA
121345820 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain