Gene : evm_27.TU.AmTr_v1.0_scaffold00088.45 A. trichopoda v1.0
Defline:  (1 of 3) PTHR12297 - HYPOXIA-INDUCBILE GENE 1 HIG1 -RELATED Genomic Order:  43
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00088.45 Secondary Identifier:  ? PAC:31575265
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00088.45 0.5kb upstream 0.5kb upstream 7710 true AmTr_v1.0_scaffold00088: 838431-846140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00088: 845641-846140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 0.5kb downstream 0.5kb downstream 7710 true AmTr_v1.0_scaffold00088: 837931-845640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00088: 837931-838430 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 1.0kb upstream 1.0kb upstream 8210 true AmTr_v1.0_scaffold00088: 838431-846640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00088: 845641-846640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 1.0kb downstream 1.0kb downstream 8210 true AmTr_v1.0_scaffold00088: 837431-845640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00088: 837431-838430 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 2.0kb upstream 2.0kb upstream 9210 true AmTr_v1.0_scaffold00088: 838431-847640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00088: 845641-847640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 2.0kb downstream 2.0kb downstream 9210 true AmTr_v1.0_scaffold00088: 836431-845640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00088: 836431-838430 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 5.0kb upstream 5.0kb upstream 12210 true AmTr_v1.0_scaffold00088: 838431-850640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00088: 845641-850640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 5.0kb downstream 5.0kb downstream 12210 true AmTr_v1.0_scaffold00088: 833431-845640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00088: 833431-838430 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 10.0kb upstream 10.0kb upstream 17210 true AmTr_v1.0_scaffold00088: 838431-855640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00088: 845641-855640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 10.0kb downstream 10.0kb downstream 17210 true AmTr_v1.0_scaffold00088: 828431-845640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.45 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00088: 828431-838430 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045148 5273 Angiosperm View MSA
121347874 5274 Embryophyte View MSA
123423754 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain